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Created by Miquel Duran-Frigola@mduranDeveloper

Error with util performance

Hi Oriol. When, inside /aloy/home/mduran/myscripts/chemical_checker/package/scripts/preprocess/D2.001, I run:

python run.py -o /aloy/home/mduran/myscripts/mosaic/manuscript/revisions/nbt/data/D2.001_sign0.h5

I get the following error.

Traceback (most recent call last):
  File "run.py", line 14, in <module>
    from chemicalchecker.util.performance import gaussian_scale_impute
  File "/aloy/home/mduran/myscripts/chemical_checker/package/chemicalchecker/util/performance/__init__.py", line 1, in <module>
    from .linkprediction import LinkPrediction
  File "/aloy/home/mduran/myscripts/chemical_checker/package/chemicalchecker/util/performance/linkprediction.py", line 6, in <module>
    from .performance import PerformanceBinary
  File "/aloy/home/mduran/myscripts/chemical_checker/package/chemicalchecker/util/performance/performance.py", line 6, in <module>
    from sklearn.metrics import davies_bouldin_score, calinski_harabaz_score
ImportError: cannot import name 'davies_bouldin_score' from 'sklearn.metrics' (/opt/miniconda3/envs/py37/lib/python3.7/site-packages/sklearn/metrics/__init__.py)