... | ... | @@ -73,13 +73,13 @@ I recommend visiting the [NAR Online Molecular Biology Database Collection](http |
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* A standard pathway database
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* [X] MetaPhORS [[paper](https://academic.oup.com/nar/article/39/5/e32/2409505) [data](orthology.phylomedb.org/)]
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* Orthology and paralogy relationships between genes
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* [X] PathwayCommons [[paper]() [data]()]
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* [X] PathwayCommons [[paper](https://academic.oup.com/nar/article/39/suppl_1/D685/2506078) [data](https://www.pathwaycommons.org/)]
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* Integrative interaction database, using pathway data
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* [X] Reactome [[paper]() [data]()]
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* [X] Reactome [[paper](https://dx.doi.org/10.1093%2Fnar%2Fgkv1351) [data](https://reactome.org/)]
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* A standard pathway database
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* [X] Recon [[paper]() [data]()]
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* [X] Recon [[paper](https://www.nature.com/articles/nbt.2488) [data](https://www.vmh.life/#home)]
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* Currently, we are using version 1 of Recon.
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* [X] STRING [[paper]() [data]()]
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* [X] STRING [[paper](https://dx.doi.org/10.1093%2Fnar%2Fgkw937) [data](https://string-db.org/)]
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* Protein interaction database
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* Includes physical and regulatory interactions
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