cc_config.json 881 Bytes
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{
    "PATH": {
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        "CC_ROOT": "'/aloy/web_checker/current'",
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        "CC_DATA": "'/aloy/scratch/oguitart/download/'",
        "CC_TMP": "'/tmp/'",
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        "CC_REPO": "'/opt/chemical_checker'",
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        "SINGULARITY_IMAGE": "'/aloy/web_checker/images/cc.simg'",
        "validation_path": "'/aloy/web_checker/package_cc/validation_sets/'"
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    },
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    "VERBOSITY": {
        "level":"'warning'"
    },
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    "DB": {
    	"dialect": "'postgresql'",
    	"port":  "'5432'",
    	"host": "'10.5.4.240'",
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    	"user": "'cc_user'",
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    	"password": "'checker'",
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    	"database": "'cc_package'",
        "calcdata_dbname": "'cc_calcdata'",
        "uniprot_db_version" : "'2019_01'"
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    },
    "HPC": {
    	"system" : "'sge'",
    	"host": "'pac-one-head'",
    	"queue": "'all.q'",
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    	"username": "'cc_user'"
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    },
    "TOOLS": {
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        "node2vec_exec" : "'/opt/node2vec'"
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    }

}