Pipeline · Packages / chemical_checker

trying differenc conda channel for rdkit, hopefully does not mess with numpy

5 jobs for master in 63 minutes and 11 seconds (queued for 3 seconds)

Name Stage Failure

	Name	Stage	Failure
failed	unittest_python_3.7	Unittest
	tests/test_clus.py 2021-06-13 05:14:19,053 chemicalchecker.core.chemcheck.ChemicalChecker [WARNING ] Empty root directory, creating root and dataset dirs 2021-06-13 05:14:19,428 faiss.loader [INFO ] Loading faiss with AVX2 support. 2021-06-13 05:14:19,572 faiss.loader [INFO ] Successfully loaded faiss with AVX2 support. 2021-06-13 05:14:19,699 chemicalchecker.core.signature_data.DataSignature [WARNING ] Mappings are not available, using implicit key-key mappings. INTEL MKL ERROR: /opt/miniconda3/envs/py37/lib/python3.7/site-packages/faiss/../../.././libmkl_avx2.so.1: undefined symbol: mkl_sparse_optimize_bsr_trsm_i8. Intel MKL FATAL ERROR: Cannot load libmkl_avx2.so.1 or libmkl_def.so.1. make: *** [Makefile:42: test] Error 2 make: Leaving directory '/test/package' ERROR: Job failed: exit code 1

failed

Unittest

tests/test_clus.py 2021-06-13 05:14:19,053 chemicalchecker.core.chemcheck.ChemicalChecker [WARNING ] Empty root directory, creating root and dataset dirs
2021-06-13 05:14:19,428 faiss.loader [INFO    ] Loading faiss with AVX2 support.
2021-06-13 05:14:19,572 faiss.loader [INFO    ] Successfully loaded faiss with AVX2 support.
2021-06-13 05:14:19,699 chemicalchecker.core.signature_data.DataSignature [WARNING ] Mappings are not available, using implicit key-key mappings.
INTEL MKL ERROR: /opt/miniconda3/envs/py37/lib/python3.7/site-packages/faiss/../../.././libmkl_avx2.so.1: undefined symbol: mkl_sparse_optimize_bsr_trsm_i8.
Intel MKL FATAL ERROR: Cannot load libmkl_avx2.so.1 or libmkl_def.so.1.
make: *** [Makefile:42: test] Error 2
make: Leaving directory '/test/package'
ERROR: Job failed: exit code 1